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msmu.dt.save_layer

Save a copy of a modality's .X in a named layer, in place.

Parameters:

Name Type Description Default
mdata MuData

MuData to modify.

required
modality str

Modality containing the matrix.

required
layer str

Destination layer name.

required
overwrite bool

Replace an existing layer when True; otherwise raise ValueError.

False

Returns:

Type Description
MuData

The same MuData with .X copied into .layers[layer].