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msmu.io.read_sage

Reads Sage output and returns a MuData object.

Parameters:

Name Type Description Default
identificaton_file

Path to the results.sage.tsv.

required
label Literal['tmt', 'label_free']

Label for the Sage output ('tmt' or 'label_free').

required
quantification_file str | Path | None

Whether to include quantification data. Default is None.

None

Returns:

Type Description
MuData

A MuData object containing the Sage data.