msmu.utils.select_repr_protein
Select canonical protein from protein list based on priority. canonical > swissprot > trembl > contam
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
mdata
|
MuData
|
MuData object with protein groups inferred |
required |
modality
|
str
|
Modality name for protein data |
required |
Returns:
| Type | Description |
|---|---|
MuData
|
MuData object with representative proteins selected |