msmu.utils.map_fasta

Map protein groups to gene names using a FASTA metadata DataFrame.

Parameters:

Name	Type	Description	Default
mdata	MuData	MuData object containing the modality to map.	required
modality	str	The modality in the MuData object to map.	required
categories	list[str]	List of categories to map from fasta metadata.	['Protein ID', 'Gene', 'Description', 'Organism']

Returns:

Type	Description
MuData	MuData object with updated modality var.