msmu.read_sage
Reads Sage output and returns a MuData object.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
identificaton_file
|
Path to the results.sage.tsv. |
required | |
label
|
Literal['tmt', 'label_free']
|
Label for the Sage output ('tmt' or 'label_free'). |
required |
quantification_file
|
str | Path | None
|
Whether to include quantification data. Default is None. |
None
|
Returns:
| Type | Description |
|---|---|
MuData
|
A MuData object containing the Sage data. |