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msmu.pl.plot_var

Plots variable annotations using stacked bars, box/violin plots, or histograms.

Parameters:

Name Type Description Default
mdata MuData

MuData object containing the modality to visualize.

required
modality str

Target modality; defaults to 'psm'.

'psm'
groupby str | None

Observation column used to group traces.

None
var_column str | None

Variable column to visualize.

None
obs_column str | None

Observation column used for labeling/group resolution.

None
ptype str | None

Plot type inferred for numeric/categorical data when None.

None
bins int

Number of bins for histogram view.

30
**kwargs str

Additional layout options forwarded to Plotly.

{}

Returns:

Type Description
Figure

Plot of variable annotation distributions.