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msmu.pl.plot_upset

Draws an Upset plot showing protein intersections across observation groups.

Parameters:

Name Type Description Default
mdata MuData

MuData object containing the modality to visualize.

required
modality str

Target modality; defaults to 'protein'.

'protein'
subset str | None

Specific observation value to subset on; optional.

None
subset_column str | None

Observation column used for subsetting.

None
groupby str | None

Observation column used to define sets.

None
obs_column str | None

Observation column used for labeling/group resolution.

None
**kwargs str

Additional layout options forwarded to Plotly.

{}

Returns:

Type Description
Figure

Upset diagram of protein intersections.