msmu.pl.plot_missingness
Plots cumulative data completeness percentages for a modality.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
mdata
|
MuData
|
MuData object containing the modality to visualize. |
required |
modality
|
str
|
Target modality (psm, peptide, protein, or site). |
required |
obs_column
|
str | None
|
Observation column used to order samples. |
None
|
**kwargs
|
str
|
Additional layout options forwarded to Plotly. |
{}
|
Returns:
| Type | Description |
|---|---|
Figure
|
Step line plot of cumulative completeness. |