msmu.io.read_maxquant

Alias for :class:_MaxQuantFacade.

Parameters:

Name	Type	Description	Default
identification_file		Path to the MaxQuant output directory.	required
label		Label for the MaxQuant output ('tmt' or 'label_free').	required
acquisition		Acquisition method ('dda' or 'dia').	required

Returns:

Type	Description
_MaxQuantFacade	A MuData object containing the MaxQuant data at precursor level

Usage

mdata_precursor = mm.read_maxquant(search_dir) mdata_protein_group = mm.read_maxquant.from_pg(search_dir)